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Hi,
My fMRI-prep crashed because my device ran out of space, is there anyway to resume it from where it stopped after I have fixed the issue with memory?
It takes roughly about 2 weeks to run th…
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![3d image](https://camo.githubusercontent.com/b9b4bd8f9a07082bd4fc55616da254101815e470/68747470733a2f2f7261772e6769746875622e636f6d2f7269692d6d616e676f2f5061706179612f6d61737465722f646f63732f696d6167…
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Beyond numpy, nibabel loads the following modules on import:
```Python
{'PIL',
'PIL.Image',
'PIL.ImageMode',
'PIL._binary',
'PIL._imaging',
'PIL._util',
'PIL.version',
'__mp_main__',…
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I ran into an issue when writing a few of the tests in `test_utils.py` that I think is only going to get worse as we encourage writing new tests; namely, we assume that all the functions in the repo a…
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Hi,
I am trying to build the connectome workbench 1.3.2 using GCC 4.8.5, Qt 5.9.1, Mesa 17.2.3 and CMake 3.11.1. The build almost finishes and then fails at 93% with the error message:
```
[ 93…
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Partially rhetoric, partially actual question. Why do you maintain this when HDF5, a more general, faster, well-documented, proper file format exists for storing exactly the same type of data, but for…
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Hi Anderson,
Our lab has been processing our data with the HCPPipeline, and are now looking to run PALM on the CIFTI output. We are following the [documentation for Case 1](https://fsl.fmrib.ox.ac.…
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### Currently supported
- [x] Allow the user to change the atlas used in brain extraction (as long as the selected atlas has a binary brain mask, although it would be better to use only templates t…
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I have a vertstats file I'd like to use a "label" set, rather than a continuous statistics set.
Loading it with the regular method doesn't look nice, as the labels cover a wide range and don't map ni…
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I have freesurfer files which are in LIA orientation, and a final space template in RAS. My pipeline looks something like this
# Attempt 1: go straight from LIA using fsl tools...
mri_convert -…