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Why do these two packages of the same distribution file return different versions?
```
➜ ~ curl http://cpanmetadb.plackperl.org/v1.0/package/Bio::Root::Version
---
distfile: C/CJ/CJFIELDS/BioPerl-…
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Make sure the annotations on the biodiversity catalogue (https://www.biodiversitycatalogue.org/services/70) comply with BioVeL's requirements.
rvosa updated
10 years ago
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If I understand the schema correctly, nexml permits multiple otus blocks, though I haven't seen this used.
In writing a function to add characters data to an existing `nexml` object, we run into th…
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We will want either/both of:
- A function to extract all the metadata nodes from the S4 object and summarize this data neatly (more obvious for top-level metadata, less clear how to present the annota…
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I uploaded a study, Jørgen Lützen, 2003, and the tree does not appear when I click the file to view it (I want to root it and designate the ingroup). No errors appear when I upload the file as a new…
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Now that it is so relatively painless to extract RDF and run SPARQL queries on it (incidentally: great job, supercool) I think it would be good to develop a more persuasive use case to demonstrate the…
rvosa updated
10 years ago
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Goal 2 from Kseniia's list, mentioned in https://github.com/ropensci/RNeXML/issues/21#issuecomment-25735531
Will be a good example for the manuscript, once gov't shutdown ends and the taxize servers…
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Part of the goal of `RNeXML` is to facilitate publishing phylogenetic trees with rich metadata in NeXML as supplements to publications and facilitate sharing. While it is relatively trivial to uploa…
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I'm intrigued by @rvosa's suggestion of showing how RNeXML can be used to document both the character data and phylogenetic data used in comparative phylogenetics, which accounts for many of the R pac…
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``` coffee
library(RNeXML)
library(geiger)
data(caudata)
add_characters(as.data.frame(caudata$dat))
```
```
Error in .subset2(x, i, exact = exact) : subscript out of bounds
```
Check remainder of da…