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**Elassandra version**: 6.8.4.10
**Plugins installed**: []
**JVM version** (`java -version`): Version 8 Update 251
**OS version** (`uname -a` if on a Unix-like system): WIN10
**docker …
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## The problem
TreeTime has currently a very rudimentary way of resolving polytomies (multi-furcations in the tree).
When this was initially put in place it was never meant to resolve large polyt…
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Hi,
I'm having an issue with the "selectedPathways" argument in the oncoplot function, when using my own user-defined pathways. I either get the error below (with code):
```
oncoplot(maf = wgs.m…
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**Describe the bug**
we´ve updated our stryker vorm V4.06 to V4.3.0 but now I get the following error while mutating a project. We are using .net-framework 4.6.1. so far I can tell msbuild version …
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If `node_data` contains data such as lists, validation of the output json in export fails here:
https://github.com/nextstrain/augur/blob/cc3b7bdb6faf370c496efc798b10e4a3d014bef4/augur/export_v2.py#…
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[testng] 22:07:50.731 [SharedPool-Worker-2] DEBUG c.s.c.lucene.service.LuceneIndex - actional_dashboard.reportconfig.lucene update document Document with term _primary_key:[0 10 61 63 30 39 37 34 3…
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Hi,
I'm trying to exclude getter/setter methods from line coverage but I cannot.
I tried with the annotations @Generated, @DoNotMutate and @CoverageIgnore with CLASS as RetentionPolicy but it didn…
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**Describe the bug**
The Stryker log contains a message that I should create an issue on Github.
**Logs**
[08:53:56 WRN] Stryker.NET encountered an compile error in ...\CustomTplBlocks\PriorityBl…
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We should probably add local control values to the language (write-once, i.e. let-bound).
Additionally, we should consider allowing memory annotations on these variables. It would solve several co…
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Reported at https://github.com/checkstyle/sonar-checkstyle/issues/519
````
$ cat TestClass.java
package uk.co.XXX.msa.vpspointsmanager.vpspmvdpeventsservice.service.ddp.service;
import org.spr…