-
First!
The original design here was framed as a response to some HTTP request. But I realize that the design and thinking has moved on somewhat since then. Treating this as a bundle of resources …
-
Hi,
Thank you for this awesome program. I have two questions about running it:
_Question 1_
1) In what folder should I open the "BQ" python environment? I currently have two folders relevant to t…
-
Hello,
I'm working with a mixture of low (5-10x) and very low (0.5x) coverage WGS sequences. I've got about 900 of them from a diverse set of populations, and variants are discovered every 10-20bp. I…
nreid updated
4 years ago
-
#### Is your feature request related to a problem? Please describe
Our client time windows are hard right now: any violation immediately causes infeasibility. That is not always realistic in practi…
-
Hi there,
When I run HATK on one dataset, the association output has only worked for SNPs with rsids.
The following error is displayed and no heatmaps are produced?
Do you know what could be causin…
-
In Step 2a of Section 5.3 Cluster matching of CSS Fonts 3:
> If c1 is a variation selector, system fallback must be used to find
> a font that supports the full sequence of `b + c1.
I've tested C…
-
During Nakamoto development, we have run into a few deadlocks from accessing databases. I think it would be possible to refactor the code to help prevent these types of deadlocks. There could be some …
-
Hi there,
I'm running Masurca v4.0.9 and am having an issue using POLCA to polish a Flye assembly with Illumina reads where it prints the following error:
```
polca.sh -t 2 -a assembly_polished.…
-
I was looking at `aws-sdk`, which uses `parser.ini` to parse configuration and credential INI files, which uses this library as a parser. The parse was failing since windows ends its lines with `#\Ret…
-
Hello,
I used the HPRC pangenome (https://s3-us-west-2.amazonaws.com/human-pangenomics/pangenomes/freeze/freeze1/minigraph/hprc-v1.0-minigraph-grch38.gfa.gz) to do the analysis. My processes to …