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**Description**
I am new to bactopia and following the posted tutorials. In an early step to install bactopia datasets, I did the following:
conda create -y -n bactopia -c conda-forge -c bioconda …
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Hello,
Are we expecting Protégé to reason over 'roles', for example drug ? It doesn't seem to be:
Thanks, Pascale
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**Description**
While working through the tutorial, the following error is generated while trying to download and process a single sample from the SRA:
Species 'Staphylococcus' not available, plea…
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How do we begin annotating the microbial taxonomy with morphological and physiological properties? For example:
* [obligate aerobes](https://en.wikipedia.org/wiki/Obligate_aerobe)
* [facultative ana…
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Hi, thanks so much for creating this awesome tool, I'm eager to get it working! I've run into a couple of errors that I can't seem to figure out-- thanks in advance for your help!
1) I first ran i…
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Prokka returned some result of antimicrobial resistance genes, when i blast protein sequences to card, it returns different result to me, like geneA annotated as some type of ARG in prokka and geneB r…
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When two lines have the same "title" AND "year" AND "authors" keep only one (the first? the most complete?)
Below the three key in ISI and SCOPUS:
- title --> ISI = TI / Scopus = Title
- year -->…
tommv updated
3 years ago
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We found the term meaning
"effector-triggered immunity /immune signalling "
GO:0009870 defense response signaling pathway, resistance gene-dependent
Rename
effector-triggered immune signaling …
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Quoring sensing is defined:
The process in which single-celled organisms monitor their population density by detecting the concentration of small, diffusible signal molecules produced by the cells …
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Most of the other galaxy tools are set up under headers e.g.
**Annotation**
- Prokka Prokaryotic genome annotation
- MOB-Recon Type contigs and extract plasmid sequences
- MOB-Typer Get the plas…