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Where is the fused brain connectivity network (DTI-strength penalty term) implemented in the code? I don't seem to have found it.
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After copying & pasting the "putnifti.py" file to my working directory, I ran:
```
python putnifti.py '52.91.173.4/nd' 'FA_Maps' 'dti' 'KKI2009_113_1_DTI_aligned.nii'
```
The resulting url was pri…
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make a class `UDF2`
```java
public abstract class UDF2 {
public abstract void reset(BUF buf);
}
```
create a interface called `com.daml.dti.function.Function` ,Make `UDF2` implement the in…
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```
The CIVM has published a DTI fiber tract data set that ought to be available.
Let's track this down and put it in using the existing fiber tracts
functionality.
```
Original issue reported on …
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```
m
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## Description
There isn't currently a direct way to compute the sigma value in the CLI framework for `dipy_fit_dti` or `dipy_fit_dki` with the method as `RESTORE`. Several noise estimation sigma op…
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Current behavior
```
➜ vic git:(master) ✗ docker run -dti busybox
4623dc5aec6ccf3ae93fab7c167e15471dca17d04b6aaf4ca2c4595f36656b6e
➜ vic git:(master) ✗ docker attach 4623dc5aec6ccf3ae93fab7c167e…
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```
dti = pd.date_range('2016-01-01', periods=5)
dti.value_counts().index.freq #
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In the "scil_compute_dti_metrics.py"
the script use the fiber Nav order for coef,
should we simply use the default dipy (lower triangle order)
``` if args.tensor:
# Get the Tensor v…
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for some reason, DTI plotting doesn't work. im guessing bc greg has made changes over the last few days. regardless, something to htink about.