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I'm trying to use ASHLAR to stitch electron microscopy (EM) tiles, but although the stitching itself looks great, I don't think it offers the illumination correction needed.
The tiles (pre-stitched) …
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I'm currently adding a zarr writer to our project, which can be roughly described as data acquisition and live processing framework for electron microscopy. I'm trying to make the writing operation as…
sk1p updated
2 months ago
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Hi all,
as a followup to todays DataCarpentry onboarding I feel like a image processing workshop aimed at beginners should contain a short description of the image processing pipeline.
Lacking any p…
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Hi @mdw771, first of all congratulations for this project and many thanks for releasing it as Open Source! Using automatic differentiation for inverse problem solving is something we discussed at the …
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#### Describe the functionality you would like to see.
We want to provide readers for different luminescence spectroscopy file formats. In particular,
- [x] Jobin-Yvon XML format (`.xml`) - see http…
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Hi, first of all, many thanks for maintaining this library and in particular this port to C++.
I'm starting to write a library for scientific image processing (Electron Microscopy images) and I wa…
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DXTBX has limited support for TIFF images, mainly catering for files written by `marccd` or by some Bruker detectors. However, TIFF is more generally a common format in electron microscopy, and not al…
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Sergejs Boroviks, Zhan-Hong Lin, Vladimir A. Zenin, Mario Ziegler, Andrea Dellith, P. A. D. Gonçalves, Christian Wolff, Sergey I. Bozhevolnyi, Jer-Shing Huang, N. Asger Mortensen
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Historically, …
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I read your paper in Nature Communications, "A data reduction and compression description for high throughput time-resolved electron microscopy" https://doi.org/10.1038/s41467-020-20694-z. I enjoyed y…