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Similar to tidymodels/parsnip#483
``` r
library(tidymodels)
#> Registered S3 method overwritten by 'tune':
#> method from
#> required_pkgs.model_spec parsnip
library(p…
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figure out how to use parsnip+glmnet with a selected tuning parameter (want answer for “how do I use CV”?)
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0
I've successfully installed Lime (and glmnet) in R but when I try loading it i receive an error:
```
> require(lime)
Loading required package: lime
Error: package or namespace load failed…
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Hi
I can use vip_permute with glmnet
```
set.seed(123)
mtcars_split
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Please look at the reprex at the end of this issue.
You can download the input data from
https://e.pcloud.link/publink/show?code=XZWXInZ683FG2Squ0bLeLRNaGnzxukG1Le7
(nothing dangerous).
I tr…
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Currently the usage of glmnet_python in ipw fuction is a blocker to:
1. Using ipw on Windows (due to installation of glment_pyton) (issue: https://github.com/facebookresearch/balance/issues/26)
2. M…
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From README:
> For logistic models, y is either a string vector or a m x 2 matrix
But the following doesn't work
```julia
using GLMNet
y = ["M", "B", "M", "B"]
X = rand(4, 10)
glmnet(X, y, Bi…
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There was a great deal of students that couldn't get this to work remotely consistently for picking best lambda and the 1 SE. Passing in lambda twice is an issue to fix. There is a function OneSE th…
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prerequesites
- [x] map all scores to specific set of pathways
- [x] use same pathway set input for glmnet
kinds of models
- [x] pathways
- [x] mutations and pathways as one input (to compare mut to …
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When I try to set the variable family as Binomial, glmnet just give me an error:
```julia
ERROR: MethodError: no method matching glmnet!(::Matrix{Float64}, ::Vector{Float64}, ::Binomial{Float64}; al…