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![brainarea](https://github.com/VirtualBrainLab/Pinpoint/assets/100981511/5ad5467c-54d9-4973-8b1f-25ba6343547f)
hi~May I have a question? I found that slices of two dimensions do not align well. I …
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Hi Everyone,
We have a question about microscopy data, apologies if this is the wrong place for this discussion (if so it would be much appreciated if someone could point us to the correct place).
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Hello Jenyu,
I am doing my Master's project on histology image registration using TransMorph. Since I am working in histology, i need to ensure that the local morphology of the samples is respected…
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Hello, I was wondering whether there is a documentation for training the model from scratch on any type of dataset. Thanks!
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Dear Andrew,
Thank you so much for this amazing tool. I was just wondering if there is a way to use the results obtained from **AP_histology** to use **IBL Ephys Alignment tool**. I know you menti…
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When loading the colorectal_histology_large dataset using the tensorflow api, I am not able to retrieve the labels as the features dictionary does not contain the 'label' key. Hence I am not sure how …
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Hi,
Hope you're well. I've been using the Histology data and I'm currently interested in P2A_C3H_M5 0004_Scene_2 transformed_nestin.tif. However, transformed_nestin.tif seems to be a corrupted fil…
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Bug related to output of the "3D" RGB image, it converts it into a 2D RGB image and thus looses spacing and origin on the third dimension.
Seems to be a bug with WriteImage that makes the conversi…
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#### What data file(s) does this issue pertain to?
pbta-histologies.tsv
#### What release are you using?
v15
#### Put your question or report your issue here.
The `short_histology…
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Currently using HERBS on Windows 10. I am however unable to upload my own histology image and receive this error message in the terminal when I select an image to upload:
"...image_curves.py", line…