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I tried to install azplugins-main externally on both a supercomputer and a cluster. Hoomd-blue is installed using conda v2.6.0 because I often encountered errors when trying to install from source. Ho…
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As mentioned here https://groups.google.com/g/ipi-users/c/JlWokLv0oe8, the https://github.com/SSAGESLabs/PySAGES development team is interested in interfacing with i-pi. For this, we would need to wor…
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When building Azplugins internal to Hoomd 2.9.6, 2 tests fail at import due to an import structure that assumes Azplugins is built externally:
Traceback (most recent call last):
File "/home/bj21…
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I am having a really hard time getting azplugins to build and install... I have tried both the main branch as well as the 0.11.0 release and I am trying to build against hoomd 2.9.7. For the interna…
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Since DynamO only supports sphere at present, I strongly suggest that Marcus could add more features of ellipsoids and other kinds of polyhedra into DynamO in the near future.
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Check multi-node on Young/Kathleen/Michael in particular. (We've had one working on Myriad and Thomas only).
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## New focus is on pinning down what "data space" means
https://github.com/glotzerlab/signac/issues/743#issuecomment-1100005467
## Original issue description
### Summary
Consider the fol…
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I'm a beginner in hoomd and started using the version 2.9.6. I want to implement a polymer using the following code:
hoomd.init.create_random_polymers(box=data.boxdim(L=31),
…
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### Description
`test_pivot_moves` reports an average cluster size of 0 when run on the ROCm backend (tested on OLCF Frontier). The average cluster size should be ~1.02.
### Script
```python
pytest…
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### Description
The test ends in a seg fault (tested on OLCF Frontier). The test passes on NVIDIA GPUs and shows no errors with `compute-sanitizer`.
Compiled with
* gcc/12.2.0
* rocm/5.4.3
### …