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Hello,
when calling
```
aseg2
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### What happened?
I am running a large 100 subjects data set and found a few subjects failed and reporting the error. I reran one the of the failed subjects ('sub-CCNP020') and reported the same err…
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Hi,
I'm running Fmriprep on patients with huge brain lesions, and I got this error for two of my patients.
This is the code I'm running: **fmriprep-docker /home/shymaa/Desktop/my_dataset/Participan…
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I thought it would be trivial to get MBP to run FLASH for ds000117, but it wasn't. I ended up needing to read some MRI JSON files and write some files:
FLASH synthesis code
```
"""Create FLAS…
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Whenever an HDD/USB is connected to the console, entering directories in the File Manager takes longer, regardless of whether the directory is internal or external. The amount of time it takes for the…
ghost updated
2 years ago
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### What happened?
Dear abcd-hcp-pipeline Developers,
I am currently working on processing Human Brain Network (HBN) subjects and have encountered an issue with the abcd-hcp-pipeline version 0.1.3…
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This App currently outputs mask registered to the freesurfer space (256x256x256). I believe most of Brianlife App that receives "mask" are expecting it to be in anatomy (t1/dwi) space instead. I've ad…
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WololoKingdoms recorded games can be _read_, but some of its unit IDs are different, eg because of:
https://github.com/Tails8521/WololoKingdoms/blob/master/fixes/ai900unitidfix.cpp
We can deal w…
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It turns out (I think!) you can take just about any subcortical ROI and turn it into a surface using a few FreeSurfer commands:
```
mri_tessellate aseg.mgz 17 lh.hippocampus.orig
mri_tessellate ase…
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Command:
```BASH
singularity run \
-B $LOCAL_DATAPATH/.git:/.git \
-B $LOCAL_DATAPATH/$SUBJECT/$SESSION/anat:/home/jovyan/work \
-B $LOCAL_DATAPATH/$SUBJECT/$SESSION/anat:/home/jovyan/wor…