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Added new columns and data to previous table in issue#445
| File Category | Old Data Filename | New Data Filename …
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Hello!
Recently I've had to sequence and analyse a RNA-Seq set from T. cruzi RNA. For that, I used Salmon in the alignment-independent mode (aligning to a reference transcriptome).
Typical issues as…
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HI,
I have some transcriptome data. I have mapped the reads to target bacteria (Wolbachia), and conducted spades assembly (rna-mode) from the mapped reads. Now, I want to annotate the assembly usi…
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Alex Marson indicated that his lab transfers TCRs as DNA rather than mRNA; it could be a fun project to compare his protocol with ours, perhaps in a separate work. It's also a good excuse to try to ge…
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which file to call for MRNA because in train.py it call cnn_hier_rnn_model. And if I look for MRNA implementation I could not get a clue
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### Description of feature
https://www.zymoresearch.de/products/zymo-seq-switchfree-3-mrna-library-kit
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### Aims/objectives.
The nomenclature for RNA types (table `rna_type`) is fixed *e.g.*
```mysql
+---------+-------------------+
| id | name |
+---------+-------------------+
…
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Dear Tobias:
I have part of the data 4SU labeled mRNA library built using the total RNAseq. How do I use slamDunk to analyze them. Same issue #89
By the way, what is the mismatch of the slamdunk…
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hi, when i want to undata my genome annotation,there is an error. i want to check my EVM result,so i run the command "PASApipeline-pasa-v2.5.2/misc_utilities/pasa_gff3_validator.pl",but i meet the fol…
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For example, I don't seem to find any description of the cell line in hu.csv/mixed.csv. And to confirm, is the label the reaction remaining amount or the reaction amount?