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**User story**
User is a biologist and has a dataset they want to visualize. We should point them directly to an example and the relevant documentation pages.
**Preferred solution**
We should…
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Hi Dr. Zhang,
I read your Polarbear paper and planned to run the model on some multiomics data for the Human Brain to see how well your model performs on human brain tissue. Do you have a pretraine…
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“EMSL” - “Project ID” in the metadata should probably be pre-filled and locked, as it’s added in the Multiomics Data form
The same is true for the package (based on page 5).
“DNA proposal ID”,…
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Hi Dr. Zhang,
I read your Polarbear paper and planned to run the model on some multiomics data. It seems that the data provided via the link (https://noble.gs.washington.edu/~ranz0/Polarbear/data/…
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I want to integrate my paired RNA data and Protein data as the tutorial described, but encountered an error when I'm going to get the latent space representation after training. The message is
```…
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Hi Qingnan,
I have a question about [human-retina-multiomics](https://github.com/qingnanl/human-retina-multiomics)/scPred_create_ref.R. Is this a cell type refrenece or subtype reference? I am trin…
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**Addition of Algorithm:**
My name is Matthew Marino. I am a CFDE GlyGEN summer intern working under Jeet Vora and Rene Ranzinger. I am currently trying to create multiomics workflows starting with…
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**Describe the bug**
```
Error executing process > 'single_sample_scrublet:SCRUBLET__DOUBLET_REMOVAL:SC__SCRUBLET__DOUBLET_DETECTION_REPORT (1)' …
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In the following issue #671 we discussed the major changes for SDRF specification during the next release 1.1. One of them, is the extension of SDRF for metabolomics.
> **GOAL**: The aim of adapti…
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Good day!
I would like to know whether it is possible to use SIMBA in cases where one has partially paired data (some data has only scRNA, others only scATAC and some multiome (RNA+ATAC same cell).…