-
Similar to the `to_df` for CSV it should be possible to get the networkx graph in-memory from BioCypher.
As part of this the interface for running BioCyher in online mode for CSV and Networkx can be …
-
I try to use hvplot.networkx from hvplot version 0.5.2 with bokeh to visualize a network graph.
This is code that works: a simple graph is created using networkx, and some attributes are added to t…
-
# v0.3.0
- add support for lat/lon coordinates
Reviewer: @leifdenby
- [x] support for creating mesh from lat/lon grid coordinates by using a local equal area projection
- [ ] add supp…
-
I was recently working on some benchmarking of networkx and igraph, and it appears that igraph uses a different terminology for isomorphism compared to networkx. NX distinguishes between isomorphism …
-
## A common/similar API
The algorithms.graph library is quite comparable to the specification of a nx.DiGraph object, with some restrictions, plus some nx algorithms.
The function-based structure of…
-
Is it possible to use this library to generate ASCII graphs from a NetworkX graph object?
-
Hello, Matteo
My name is Carolina Rojas Ramirez, a current graduate student at the University of Michigan. As part of my doctoral research I am using ExD to sequence protein complexes under native …
-
Use graph-tool as background network module.
-
[graph-tool](https://graph-tool.skewed.de/) seems to be a more performant replacement for `networkx`. It is available on [`conda-forge`](https://anaconda.org/conda-forge/graph-tool), although it may o…
-
KG-Microbe now has two parallel builds for two of the KGs and then two additional KGs only coming from the merge repo (and duckdb, not KGX).
The transform assets, stored in the core kg-microbe repo…