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**Is your enhancement request related to a problem? Please describe.**
User publish data as samples or reactions but find an error in the metadata they provided after the sample or reaction got publi…
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Notes from Jupyter Notebook Analysis demo and discussion in the Area A TF meeting on 8.1.2024:
* Jupyter analysis classes instead of choosing analysis type
* creating a schema category
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[Ontology Look-up Service (OLS)](https://github.com/EBISPOT/OLS) is used by TIB for vocabularies used by NFDI. Wrapping its API as cocoda-sdk provider would enable access to these vocabularies for BAR…
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This task was defined in our WG charter as: "Suggest recommendations on mapping tools, mapping creation, mapping validation, mapping documentation, and mapping publishing."
As an epic task, this is…
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- [x] Create a general README for the whole repo
- [ ] Remove the tutorial13/planning.md document (maybe copy it somewhere)
- [x] Refactor the tutorial13/tutorial13_abstract.md into a nice README.md…
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I've checked the source code and found that NFD_MAX_STRLEN is 256 and maybe used for paths. However, on Linux MAX_PATH is often [4096](https://stackoverflow.com/a/9449307/1204141). But with a 4096 buf…
ell1e updated
2 years ago
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We currently use pyyaml, which only supports yaml 1.1 and it's in question if and when yaml 1.2 support will come, see https://github.com/yaml/pyyaml/issues/116.
Using yaml 1.1 is problematic and u…
domna updated
5 months ago
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Implementation of a method/file to register (new) APIs that extend the search.
This can be used to automatically include new Search-APIs into our Search-System, as well as extend the threading.
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When SSSOM was originally introduced, the hope was that if you just give people a standard model for mapping metadata, they would magically produce better mappings. 2 years and many litres of tears la…
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In [a recent collaboration cafe](https://hackmd.io/Jakmgeu8SUmNbJ8JteExkQ?both#Breakout-rooms-Notes) we had a presentation from a team at [NFDI](https://www.nfdi.de/?lang=en) that is building out [a J…