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Hello Team,
I have some trouble with following the dataset loader for the Moad dataset.
This [line](https://github.com/gcorso/DiffDock/blob/main/datasets/moad.py#L466) suggests that there should be …
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Especially the ligands. Thanks!
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A bunch of files are missing in one or the other place. `multi_curv*d.silo` is only on the RZ for example.
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Hi Team,
Thank you for the excellent work on ESM3.
I am currently comparing the performance of ESM3 on the CAMEO and CASP14 datasets with ESMFold and AlphaFold2. The CAMEO dataset I am using is …
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### LanceDB version
v0.13.0
### What happened?
Query except FTS requires vector column name to be passed in.
Failed to infer vector column at
https://github.com/lancedb/lancedb/blob/main…
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I'm testing a dataset of ligands against the same protein. Instead of loading the same protein pdb file everytime, is there anyway to load the pdb once, and just start docking new ligand?
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Thank you for your nice work, I want to train the model on my own dataset, could you please provide me the script to build the graph from pdb files?
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Hello, the 4iiy.pdb downloaded from your code is different from the 4iiy.pdb downloaded directly from the pdb database, may I ask what you have done? And how did you convert crossdocked original datas…
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### System Info
- `transformers` version: 4.44.2
- Platform: Linux-5.15.0-1058-aws-x86_64-with-glibc2.31
- Python version: 3.10.14
- Huggingface_hub version: 0.24.6
- Safetensors version: 0.4.5
…
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Currently when debugging code you only get an error after it is raised in the except clause in the main try except block in MTEB.run. This is problematic as you don't have access to the context of whe…