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**Describe the bug**
For some reasons, tests in the `develop` branch are failing. Sample log can be found here: https://github.com/Sage-Bionetworks/schematic/actions/runs/4265741322/jobs/7425791711 a…
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* No need to add weighted https://github.com/Sage-Bionetworks/Celgene-Multiple-Myeloma-Challenge/blob/master/performance_metrics/metrics.R
* https://cran.r-project.org/web/packages/Metrics/Metrics.pd…
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### What product(s) are you seeing the problem on?
Sage Monorepo
### Current behavior
I removed all Do…
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### What projects is this story for?
OpenChallenges
### As a user, I want
As a user, I would like to be able to search organizations using substrings so that I can find an orgs without fully …
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For example on well documented class with the correct style to be used by the documentation generator:
https://github.com/Sage-Bionetworks/HTAN-data-pipeline/blob/dev/MetadataModel.py
We need t…
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Aside from metadata, we might want to have a tool that verifies a file can be open and read successfully (e.g. imaging or sequencing files of different types).
See @dgutman 's suggestion https://gi…
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Title says it all.
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We have a handful of implementations on wrappers to upload and download from Synapse in a workflow. Given this is such a fundamental piece, we have the opportunity to be very intentional about how we …
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This notebook will live in a docker-rsutdio environment similar to the projects listed below
- https://github.com/Sage-Bionetworks/docker-rstudio
- https://github.com/nlpsandbox/i2b2-phi-dataset
…
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### What projects is this feature for?
_No response_
### Description
What are the requirements to include: https://github.com/Sage-Bionetworks/spccore into the monorepo?
This will act as the cor…