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``` julia
julia> reader = open(FASTAReader, "data/2016/contig1_ac_good_depth_GOOD.fas")
Bio.Seq.FASTAReader{Bio.Seq.BioSequence}(Bio.Ragel.State{BufferedStreams.BufferedInputStream{IOStream}}(Buffered…
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Since the last development release of v0.1, we have merged lots of new features and bug fixes into the master branch. Why don't we release v0.2?
I think we need to do the following things at least:
-…
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I installed IJulia following the instructions on IJulia's homepage on my Windows 8.1 machine. When I run the command `Pkg.add("IJulia")`, this is what I get:
```
INFO: Initializing package repository…
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```
>>> 'Pkg.add("BufferedStreams")' log
INFO: Installing BufferedStreams v0.1.4
INFO: Package database updated
INFO: METADATA is out-of-date — you may not have the latest version of BufferedStreams
I…
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Precompiling the master branch of Bio.jl package crashes with segmentation fault. This is reproducible both on OSX and on Linux (logs of Travis CI are here: https://travis-ci.org/BioJulia/Bio.jl/jobs/…
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Hi,
I've set up a Lapidary docs system on the master branch at BioJulia/Bio.jl, with a make.jl file and I've followed the instructions to get travis.yml set up appropriately, and I've given Travis CI…
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We've added so many new features since Bio.jl 0.3, so I believe it's time to release a new minor version for users. Hopefully, I'd like to do that on this weekend, but if you have anything that should…
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We need to put some things together:
- [x] Description
- [x] Logo
- [x] Website
- [x] Gitter
For logos, please make sure you include a description of what it is, the licensing, and a source fil…
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The new script looks awesome! I ran the new Julia script to compare to the perl script and pushed the results. I noticed two changes.
1. The system time starts a little higher, but it does not really …
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My folder layout should be all standard.
``` jl
julia> PkgDev.register("SuiteSparse")
INFO: Registering SuiteSparse at https://github.com/JuliaSparse/SuiteSparse.jl.git
INFO: Tagging SuiteSparse v0.0…