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Submitted by timosachsenberg on 2010-10-07 12:48:40
Merging a large number of idXML files bails out with:
Error: The identifier 'OMSSA_2010-08-25T17:01:00' was used before!
Possible reason: Running…
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### Description of the bug
```
nf-core/quantms execution completed unsuccessfully!
The exit status of the task that caused the workflow execution to fail was: 8.
The full error message was:
…
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- [ ] Chemical compound formulae in Glossary
- [ ] Distinguish b/w $MS^1$ (not MS(1)), $MS^2$ (not MS(2)), MS/MS
- [ ] Mathematical expressions in tuts
Ref:
1. [doesn't work] https://github.bl…
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There are some tools that that have `` in and outputs that are apparently related to each other:
- SpectraSTSearchAdapter -spectra_files -output_files
- SpecLibSearcher -in -out
- SeedListGenera…
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In an earlier (now closed) issue of mine (https://github.com/OpenMS/OpenMS/issues/5695) I wrote that the HDX DIA data that I was inputting was failing with a SWATH maps issue in the checkSwathMaps fun…
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Submitted by hendrikweisser on 2011-04-18 23:33:09
In pepXML, search hits can be annotated with different scores. Even for different search hits of the same spectrum, the types of scores can differ. …
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If we want to easily integrate pyTOPP tools into workflows, we need a way to specify dependencies either:
1. at the tool level
2. at pyTOPP level (e.g., CTDopts)
Potential ways to manage dependen…
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To have better introspection.
https://cython.readthedocs.io/en/latest/src/userguide/migrating_to_cy30.html
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I executed build an index for a database using command:
java -Xmx30000M -cp MSGFPlus.jar edu.ucsd.msjava.msdbsearch.BuildSA -d CosmicMutantExport.fasta -tda 1
but I encountered the following…