-
---
id: neuron
version: 8.0.0
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/65687288d4c2cc3aa48f3814a6c5503f32701c32/biosimulators-neuron.json
specificatio…
-
---
id: pyneuroml
version: 0.5.11
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/65687288d4c2cc3aa48f3814a6c5503f32701c32/biosimulators-pyneuroml.json
speci…
-
name: beta
definition: Beta parameter for stabilised step size control
subClassOf: KISAO_0000242
algorithm: KISAO_0000087, KISAO_0000436
isImplementedIn: SciPy, JModelica, Odespy
Reported…
-
name: safety
altLabel: safe
definition: Safety factor on new step selection
subClassOf: KISAO_0000242
algorithm: KISAO_0000087, KISAO_0000436
isImplementedIn: SciPy, JModelica, Odespy
…
-
---
id: netpyne
version: 1.0.0.2
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/bd9ddb6e2e1db3471bc6ad1cab4d39ccf36f627c/biosimulators-netpyne.json
specific…
-
Create term: random asynchronous updating policy
Definition:
An updating policy where a single transition is picked randomly from the set of transitions enabled in this state. Thus a state will ha…
-
name: automatic LSODA/LSODAR
definition: Automatically use LSODA or LSODAR as apropriate for the given problem. Use LSODA if the problem has no roots. Use LSODAR if the problem has roots.
subCl…
-
Some models require using combined solvers (e.g. CVODE + KINSOL). It would therefore be nice to have a KiSAO term for such combined solvers. The idea is that, using the forthcoming SED-ML L1V4, we wil…
-
name: dfactor
altLabel: fac1
definition: Minimum factor to increase/decrease step size by in one step. The new step-size is chosen subject to the restriction fac1
-
name: ifactor
altLabel: fac2
definition: Maximum factor to increase/decrease step size by in one step. The new step-size is chosen subject to the restriction fac1