-
http://pybel.readthedocs.io/en/latest/overview.html#explicit-node-labels
Good idea - prefer to take labels from terminologies, but as indicated in the example in pyBEL - that won't always work
-
IntegrityError: (pymysql.err.IntegrityError) (1062, "Duplicate entry 'PubMed-15465276' for key 'type'") [SQL: 'INSERT INTO pybel_citation (type, name, reference, date, sha512) VALUES (%(type)s, %(name…
cebel updated
7 years ago
-
Right now I think the javascript assumes all citations are from PubMed and makes a link from there - this isn't always the case and it might be better to switch on the citation type.
For example, i…
-
There's a setting in GitHub to make the develop branch the default one. This is better since I think you're following the same style for releases as in PyBEL
-
[2017-07-03 12:01:20,605] ERROR in app: Exception on /api/network/query/9/export/csv [GET]
Traceback (most recent call last):
File "/usr/local/lib/python3.6/site-packages/flask/app.py", line 1982,…
-
Here's an example query for showing the state of the Tau subgraph. Ultimately it should be as simple as emailing Martin a link to the page (something like http://pybel.fraunhofer.scai.de/explore?query…
-
If you select multiple networks and create the query the union seems to fail
```
[2017-06-16 16:50:05,906] ERROR in app: Exception on /api/get_query/8 [GET]
Traceback (most recent call last):
Fi…
-
error raised from API in get_node_id
example PyBEL tuple ('Protein','MGI',Slc6a4')
-
See: https://bl.ocks.org/mbostock/4341954
-