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### Type of the feature
- [ ] New function in `sqduipy.im`?
- [ ] New function in `squidpy.gr`?
- [ ] New function in `squidpy.pl`?
- [ ] Change an existing functionality, such as default behavi…
giovp updated
2 years ago
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After i select ROI, i run "ins.export_high_res_area", the code worked firstly, but just for this one time, and it kept failing thereafter. No matter how many times i tried, it would stuck for no reaso…
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### Hi, I am currently learning Squidpy. When I run Squidpy, however, it doesn't work. This is my code, and is written following the tutorial.
```
import scanpy as sc
import anndata as ad
impor…
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Hi squidpy team,
I am just starting to try out squidpy and looks it really useful! I was wondering if it is currently possible to construct an ImageContainer object using a dask array?
I have …
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I am trying to follow the tutorial https://squidpy.readthedocs.io/en/stable/external_tutorials/tutorial_tangram.html and am wondering of how to get the img object for a real live dataset.
It would be…
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https://mp.weixin.qq.com/s/COc5xntbsy5eGFq0QZuirA
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## Description
...
## Minimal reproducible example
```python
...
```
## Traceback
```pytb
...
```
## Version
...
giovp updated
2 years ago
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Hi,
Each time I use sq.gr.ligrec() to perform receptor-ligand analysis, squidpy will re-download the interaction database. sometimes it takes a long time to download because of the poor internet. So …
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When writing tutorials, I find myself defining the same clustering function in several notebooks.
```
def cluster_features(features: pd.DataFrame, like=None):
"""Calculate leiden clustering of…
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Hi Honglei!
I am trying to install SpaceFlow but encounter some problems when I run "from SpaceFlow import SpaceFlow" after installation
> "OSError: libcudart.so.11.0: cannot open shared obj…