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Dear SBI,
I did a search for the words in my title along with the term "benchmarks," but didn't see anything. Therefore, I ask, is there an "accepted" implementation m/g/1 and lotka-voltera around so…
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Just decided to check out Stan in Julia, but cannot get the walkthough example to work.
```
julia> rc = stan_sample(sm, data=data);
ERROR: IOError: could not spawn `'C:\Users\MQ2020~1\AppData\Lo…
timbp updated
3 years ago
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---
id: cobrapy
version: 0.22.1
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_COBRApy/5919a062791498e9311566cda2c9f049616a0aa2/biosimulators.json
specificationsP…
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Hey folks,
I was working through the [Bayesian Differential Equations tutorial](https://turing.ml/dev/tutorials/10-bayesiandiffeq/#lokta-volterra-with-missing-predator-data), and I encountered an …
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---
id: ginsim
version: 3.0.0b
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_GINsim/759f7c9946204f292d6850b001d13ade38437330/biosimulators.json
specificationsPat…
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---
id: ginsim
version: 3.0.0b
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_GINsim/3919bc51e03318a585926264cbc92ffa4e6b2ef4/biosimulators.json
specificationsPat…
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---
id: smoldyn
version: "2.65"
specificationsUrl: https://raw.githubusercontent.com/ssandrews/Smoldyn/126f4339ffe4f409eedd11834eaa402fecadc867/biosimulators.json
specificationsPatch:
version: …
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---
id: vcell
version: 7.4.0.30
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.4.0.30/biosimulators.json
specificationsPatch:
version: 7.4.0.30
image:
url: ghcr.io…
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Hello,
I was wondering if it was possible to simultaneously optimize an ODE's parameters and initial conditions w.r.t. some given dataset.
The approach i followed so far was:
1. randomly sampl…
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---
id: opencor
version: "2021-05-19"
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_OpenCOR/78bb84fbd15eee4acae2a967d2e92eed00669dd3/biosimulators.json
specification…