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When running the following command, an error is raised:
~~~
julien-macbook:~ $ sct_check_dependencies
Traceback (most recent call last):
File "/Users/julien/code/sct/scripts/sct_check_dependenc…
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When trying to use `sct_propseg` or `sct_deepseg_sc` or `sct_label_vertebrae` (I think the list goes on and on) on **joplin**, I am facing this issue (copy of the terminal) :
```
u100542@joplin:~…
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Dear TractSeg experts,
I was wondering if there is any plan to include the frontal aslant tract in the TractSeg segmentation in the near feature.
Thanks, Amy
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We discussed that having of synthetic DWI data would be nice for performance testing of `sct_dmri_moco` with [-interleaved](https://github.com/neuropoly/spinalcordtoolbox/pull/2664) option.
Possib…
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I am getting the following error when running on a clean bids dir:
![image](https://user-images.githubusercontent.com/21278572/79434101-30fb7d80-7fce-11ea-9a1a-61dd3ed43a48.png)
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Hello,
I am running SCT 4.2.1 on a OSX 10.12.6
I am having trouble processing dmri data ( acquired sagittally, poor resolution ; Processing of T2 files from same patients works fine). There seems …
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A quick and lazy glimpse into the code gave me the impression that the meat of the different algorithms is stuffed into nipype's `_run_interface` method implementations. Then, the different components…
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**🚀 Feature**
Make torchio accept 4D tensors (i.e. volumes with multiple channels) as input data for `torchio.Image`.
**Motivation**
I am working on a segmentation task using partial vo…
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@SenthilCaesar , I think training part is not properly streamlined with prediction part. I trained a model, and then tried to predict from that model, however, ran into the following error:
```ba…