-
Hi, your library looks awesome, but as I have already implemented my own dataset class which does not respect the torchio ImagesDataset structure, I can not easily use the transforms you implemented o…
-
Hello, I've been running pydesigner this way:
python3.6 pydesigner.py \
-o $outpath \
--force --denoise --extent 5,5,5 --degibbs --rician \
--undistort --smooth \
--wmti --mas…
-
I installed the pip package 0.0.1 and I want to use the all_fmb_pipeline from
niflow.nipype1.workflows.dmri.fsl.artifacts.
This results in a error message hmc.sch not found.
Both .sch files are …
-
First all thank you for this amazing body of work! Could you point us to any existing examples of the usage of Monte Carlo routines from MOT?
-
### Summary
Hi all,
I am packaging the newest `nipype` version and using the test function `pytest -v --doctest-modules nipype`. I have everything in `requirements.txt` installed and everything…
-
Since fMRI folks not trained in the nuances of dMRI who plan to apply qsiprep to big datasets might be tempted not to look at their data, would it be worth training a little deep learner (e.g. using h…
-
Hi, according to BIDS naming convention, I use two magnitude and phase images as the fieldmap inputs. While, fmriprep failed to run at the beginning. The error infos :
![image](https://user-images…
-
dcm2niix version: v1.0.20190902 GCC5.4.0 (64-bit Linux)
Scanner make/model: GE DISCOVERY_MR750
Sequence: Single-shell dMRI, 32 directions (b=1000), 1 bzero
Hi Chris,
dcm2niix is giving me the…
-
Dear Experts,
I am converting DMRI DICOM files from Siemens Prisma using the most recent version of dcm2niix.
Specifications for orientations in Scanner is as below:
Sagittal (X) Right to Left
…
-
for smaller graphs, we might want to do analyses jointly on dMRI and fMRI,
and it would be somewhat easier if they were both stored in the same format.
so, a utility function that converts weighted…