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https://squidpy.readthedocs.io/en/latest/api.html
giovp updated
2 years ago
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## Description
hello again :)
I am trying to add a point layer to napari in interactive mode. I follow these indications to add cells positions that I got with tangram: https://forum.image.sc/t/…
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It would be great if this package could be distributed via condo-forge as well as pip. I'd like for `mamba install squidpy` to work so the package doesn't have to be special cased when making a conda …
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## Description
Dear all
again many thanks for your help on spatial transcriptomic data ....
I have some trouble using **squidpy.gr.ligrec** : error message: Failed to establish a new connecti…
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## Feature
The `Interactive` viewer is currently implemented as an **application** (wrapping and using Napari as a view component), which can, as far as I could see, only be launched from a Jupyter…
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Hello Everyone!
I'm Daniel, a PhD student at [saezlab](https://saezlab.org/). I'm opening this GitHub issue motivated by our recent comparison of cell-cell communication methods[1] as well as disc…
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Hi,
Does sq.pl.ligrec support plots similar to cellphoneDB ?
Because when there are many clusters, the interaction plot generated will be very large and hard to save and to see. In this case, the fo…
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The developer docs of this template should contain everything that is not part of the scanpy deverloper docs we are linking from there.
- [ ] bump2version/release process
- [x] setting up codec…
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I've seen a lot of information about documenting python functions but have not seen anything for documenting R functions in a similar manner?
I'm trying to create documentation for R functions tha…