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Dear authors,
I have found some label inconsistencies in the 2D segmentation dataset. For example in the **frame 141** (zero-based) of `segment-8956556778987472864_3404_790_3424_790_with_camera_lab…
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Thanks for the great work!
Do you have the evaluation (especially Betti errors) script somewhere for the 2D binary segmentation task?
Another question is did you perform early stopping, learning…
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Dear all,
as I could not get Micro-Sam to work with the Windows-Installer, I tried again with Mamba.
However, now I get the following error:
Failed to import command at 'micro_sam.sam_annotato…
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Test MONAI implementation of dynUNet on our fetal brain segmentation task to check its performance compared to the nnU-Net framework.
Follow the tutorial: https://github.com/Project-MONAI/tutorials/b…
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Hi!
Dear author:
Thank you for open-source such a great work!
Due to the need of my current research,I would like to make a change based on your work , which would require another specific 2D segme…
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Is it possible to use Swin-Unet on 2D images for different types of segmentation tasks? And if so, how should I proceed?
Gnkgo updated
3 months ago
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**Is your feature request related to a problem? Please describe.**
Cellpose natively supports 3D segmentation; we have so far used it in "pseudo 3D mode", where you segment each z-slice separately, a…
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When I run `Nuclei_localization.py` I get the following error.
```python
bioio_base.exceptions.UnsupportedFileFormatError: BioImage does not support the image: 'https://allencell.s3.amazonaws.com/ai…
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Hi there, I have been introduced to Elastix as a possible solution for some of my image alignment needs, and have been running into the aforementioned segmentation fault issue when I try implementing …