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Hi,
The motif analysis tool required structure prediction. I run it (it was rather slow, quite surprising), and it crashed (halted but didn't shut down) was ~20 hours ;) ) [Windows 10 Home]. Here are…
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Hey,
I have been noticing that when Aptasuite is trying to load information (only confirmed for the clusters page so far) it is only using one of the four available cores, which results in each cl…
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Hi there,
I am running the latest version of AptaSuite on a Macbook Pro, running macOS High Sierra.
I click on the .jar file, the GUI launches and the functionality seems fine.
I have run …
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Hi,
The LazyCache doesn't work properly - after getting back to a cluster that has been previously analyzed and stored in the cache, the sequences are not displayed at all. Windows PowerShell log att…
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Received the following error after running the follow job:
java -jar aptasuite-0.9.2.jar -parse -predict -trace -config
```
Exception in thread "pool-1-thread-1" java.lang.NullPointerException …
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Hey, I was using the program just fine on one computer and it is importing the FASTQ files. To save time I went to use the program on a second file to import two different databases as well but the mo…
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I'm not sure how other people work. But personally having 150 million sequences to work with I had to do all the analyses on a supercomputer server and then move all the files in a local windows compu…
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As promised - here we go... ;)
Hi,
I found out that in my dataset (paired-end fastq from Illumina), around half of the sequences is reverse complemented in regards of the actual selection library …
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Hi,
I've tried to run the motif analysis (AptaTrace) on my data (full selection data, cluster-analyzed; in GUI v0.8.9, run in Win10 through PowerShell as Administrator) with default setup, after the …
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Hi,
Lately analysing my data I'm having quite a lot of Invalid cycle reads. I'm still wondering and searching if it's my fault or the software's, but that's quite tedious. What would help quite a bit…