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Hello!
Thanks a lot for making this tool available. I ran the demo and analyzed the sample dataset with no issues but when testing charcoal on my own dataset I am running into errors which seem to…
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The process for signing up for the Charcoal Team is currently broken.
Users with a role other than Flagger can go to [this page on MS](https://metasmoke.erwaysoftware.com/channels/email) and get an…
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### Describe the bug
Charcoal numbers are reduced without actually filling the charges of either the smoking rack or rock forge when recharging non empty buildable.
### Steps to reproduce
--Le…
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I installed `charcoal` by the book and tried to run the demo as documented in the README. Alas!
```python
python -m charcoal run demo/demo.conf -j 4
** read 2 provided lineages
** config file ch…
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**Back-task** #6725
yammer 3794
product / add-on
if one product has Add-on links, then they should work as a cloud of links for each mentioned product, include links between the mentioned prod…
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The Reactor Planner's simulation and in-world Nuclear Reactor testing function correctly, and are the same.
The Heat Exchanger, Balancer, and Pump stats shown in the Reactor Planner are **half** of t…
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Hi,
Can I use charcoal to decontaminate single assembly file? I have eukaryotic genome assembly with potential microbial contamination. Unfortunately this is completely new eukaryotic species so I …
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as of the merge of #160, charcoal now performs the following steps -
1. find candidate genomes for contamination analysis, based on sourmash shared hashes with GTDB r95
2. download genomes and per…
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Trying again to run the Demo from the instructions, but this time, there is something broken with respect to LineagePair from sourmash.lca.
I also don't know why in the output it says == This is so…