-
Hi.
I'm tryin to use scNorm to normalize scRNA data for dowstream analyses with limma to retrieve diferentially expresses genes.
Currently I'm playing with a matrix of 109 cells (~80 belong to c…
-
Hi everybody, I found myself stuck with an issue regarding gene names. I have downloaded data mapped on hg38 for which, at the end of the DEA, I obtain only ENSG codes instead of gene names. I would l…
ghost updated
4 years ago
-
Hello!
First of all thank you so much for sharing this app with the community!! It is very easy to use and really really powerful
During the analysis of SKCM, a error is reported as I show you bel…
-
For example here:
dataNorm
-
Hey,
I have to download some .exe Files from a server but as I have read, anglesharp is not able to do this.
I found this [thread](https://github.com/AngleSharp/AngleSharp/issues/435) where someone…
-
Dear SCnorm team,
thanks for releasing the program, I am testing it out at the moment.
I am applying SCnorm to a fairly large data set (8251 genes x 1157 cells):
```
DataNorm = SCnorm(counts.n…
-
Hi,
I am trying to perform normalization of single cell RNA-seq data from Fluidigm C1. There are three time points. For each time point, there are three chips (replicates). The gene expression is e…
sqjin updated
6 years ago
-
Hi
I am trying to test SCnorm on a single cell data set from 10x genomics using the following UMIdata command:
"DataNorm
-
Hi,
With the current version of SCnorm 0.99.3, I tried the following code in the user manu:
data(ExampleData)
Conditions = rep(c(1), each= 90)
DataNorm
-
Is there an example MultiCondData? I am trying to follow the vignette example for multiple conditions, but am running into an unknown error:
```
R
R version 3.4.1 (2017-06-30) -- "Single Candl…
byee4 updated
7 years ago