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Hi Deriva team,
Question:
I have a “superset_collection” with X number of "subset-collections" and "xxxx_in_collection.tsv" files are filled including each subset-collection. If I download the bdb…
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if we start making templates for these snakemake vidlets, we should outline what the necessary components are.
some of things I think we will need --
* we want people to be in the right location…
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During the last submission, we were unable to add gene information as the validation script found an error in collection_gene.tsv. When we investigated the reason, we found that the file was failing b…
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During this breakout session, the Data Stewards will give an in-depth presentation of their data, QC processes, curation, users and use cases.
Proposed by Mary Shimoyama
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Hi @cmungall ,
We are planning on expanding Metadata Matrix to include phenotype mappings from Human Phenotype Ontology (HPO) and Mammalian Phenotype Ontology (MP).
I see there is a mapping file a…
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Note that this is different from #144.
This feature request is for the ability to search the history of public Slack channels in the NIH-DCPPC workspace.
We have two options:
**OPTION 1: FULL…
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For example, this URL used to be valid but now gives a 500 Internal Server Error:
https://doi.org/10.25491/zzv1-xb48
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The following three DATS schemas all define "identifier" as having format "uri":
* identifier_info_schema.json
* alternate_identifier_info_schema.json
* related_identifier_info_schema.json
How…
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Uncle Archie needs to run tests, and sometimes that requires credentials. So, let's talk credentials.
There are two sets of credentials that we're talking about here.
The first set of credential…
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Most commonly used approach is using annotationProperty: database_cross_reference (example: http://purl.obolibrary.org/obo/DOID_9351). When multiple mapped terms need to be listed, what is the corre…