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From the paper "Tsunami propagation over varying water depths" of Taemin Ha and Yong-Sik Cho.
First implement the simpler formula
![image](https://user-images.githubusercontent.com/3409401/4388341…
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There still are some problems with the y labels in dispersion_plot.
When using it like this:
from nltk.book import text2
words = ["Elinor", "Marianne", "Edward", "Willoughby", …
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Would it be possible to add dispersion parameter information to the tidy output? Ideally, it would also be nice to have the option to exponentiated and exponentiate+square root transform the estimates…
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I think this would benefit from being split into two pages
One giving the science overview, and the usage keywords (i.e. how to use each method)
The second giving the technical details and p…
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As a follow-up of #877
Following families need validation or don't yet work:
- [ ] betabinomial
- [ ] hurdle models
- [ ] zero-inflated models
- [ ] glmmTMB::compois
- [ ] glmmTMB::genpois
…
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**Describe the bug**
My following code
```python
from pydeseq2.dds import DeseqDataSet
from pydeseq2.default_inference import DefaultInference
inference = DefaultInference(n_cpus=1)
dds = …
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The plasma dispersion function arises naturally when finding dispersion relationships for thermal plasmas; specifically when the particle distribution functions are Maxwellians. However, collisionles…
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FFT based on callback + evaluation;
https://github.com/ExCALIBUR-NEPTUNE/NESO/blob/3c24d8dad16d5f7d51ee3f9521789fe6480d537d/include/nektar_interface/utilities.hpp#L98
https://github.com/ExCALIBUR-…
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When known false positives are sparse (possibly and partly a consequence of codeset crowding) there may be empty bins for lagdiff that would hold a substantial proportion of data had there been more d…
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When estimating a restraint free energy by changing the force constant (section 6.5.3 in the user guide), dA/dLambda is accumulated and printed in the log file (without any measures of dispersion).
…