-
See http://fiji.sc/bugzilla/show_bug.cgi?id=1022
ImageJ 1.49q5 will add a `quittingViaMacro` method which bypasses the save dialog for dirty images when `quit` is called in a macro.
We will want to …
-
Hello,
I would like to know if it is possible to run the plugin in a headless mode directly in command line or in a macro.
I tried using fiji but I could not fin a way to do it properly. Indee…
-
I might be missing something.
ImageJ/Fiji doesn't track windows opened by plugins, so macros cannot close them in batch. The user has to close hundreds of copies of the JACoP window manually.
M…
-
I am not sure what is wrong..
Below are the logs:
Start deconvolution...
Warning: File: deconv_par.m Line: 40 Column: 13
The temporary variable 'im_folder_name' will be cleared at the beginnin…
-
Hello all,
I'm working on analyzing batches of images. The macro runs perfectly fine when each image is in a separate folder. However, when I run multiple images in one folder (and increase the # of …
-
When executing ImageJ scripts, plugins or macros headlessly, it would be nice if the process could give a non-zero return code in case of error. Currently, ImageJ1 does not do this.
Added by @luxigo:…
-
Hi, I just started using ImageJ and Docker a little ago, I'm trying to run a script, but an error keeps popping up. This is my command
*sudo docker run -it --rm fiji/fiji fiji-linux64 --headless -…
-
Given the following ImageJ macro:
```
function pickFile(){
return File.openDialog("Pick a file");
}
function notBuggy(){
return toString(pickFile());
}
function buggy(){
return pickF…
AVHon updated
7 years ago
-
Hi there,
I keep getting this error message when I run this macros on Fiji.
![New Note](https://user-images.githubusercontent.com/91810899/139701043-068d2f4d-c486-4499-b813-def4cfa3a258.…
-
I´m using anaconda .
This comes up when i start the program with "bash"
\ANDA_Test\ANDA-main>Bash anda.sh
anda.sh: line 28: unexpected EOF while looking for matching `)'
anda.sh: line 42: synta…