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https://bioentity.link//#/publication/10.1093/g3journal/jkae219
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Dear hangnoh,
Thank you for writing this awesome script!
Not sure if you are making further updates to the 'flybaseR' package, but I noticed the `form` variable in the `id.coverter()` is not compa…
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_From [dosu...@gmail.com](https://code.google.com/u/102674886352087815907/) on March 04, 2013 03:31:22_
= What steps will reproduce the problem? =
ontology-release-runner --reasoner hermit flybase_c…
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Flybase annotates abnormal anatomical entities with FBBT terms; downstream tools need to be able to distinguish FBBT terms from their phenotypes, and need a term for "abnormal eye". Can we find out fr…
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#### Project link
https://github.com/orgs/geneontology/projects/223
#### Project description
The purpose of this project is to:
- align the pathways widget version in use across the GO (i.…
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https://bioentity.link//#/publication/10.1093/genetics/iyae188
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Example ribbon from FlyBase - https://flybase.org/reports/FBgn0050446
Idea is ribbon of squares with heat map colours and text for each square.
For now:
Badges are currently mostly neurotransmi…
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- Use FBte IDs from list generated in issue https://github.com/cbergman/transposons/issues/13
- Note: there are Symbol Synonyms and Name Synonyms
- Note: there are redundant synonyms for both symbols …
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https://monarchinitiative.org/gene/FlyBase:FBgn0014445
FlyBase assigns this to be a Scer (yeast) gene, which is of course correct
But this means that we end up with 6 "yeast genes" with nervous syst…
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It is worth exploring whether there are better alternatives to insect KEGG pathway annotation than KOBAS since when we developed the pipeline ~5 years ago.
General considerations:
- have other dat…