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It exists in FlyBase
http://flybase.org/reports/FBtp0060652.html
And we have a registered image
http://flybrain.mrc-lmb.cam.ac.uk/vfb/jfrc/fl/reformatted-quant//JFRC2_GMR_47H03_AE_01_08-fA01b_C…
mmc46 updated
7 years ago
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##### Description of the problem
Missing pubs (and stage) on expression reports
e.g.
![image](https://user-images.githubusercontent.com/112839/89522762-a4bdd200-d7d9-11ea-9d81-fb417a8cc18a.png…
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Flybase annotates abnormal anatomical entities with FBBT terms; downstream tools need to be able to distinguish FBBT terms from their phenotypes, and need a term for "abnormal eye". Can we find out fr…
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https://monarchinitiative.org/gene/FlyBase:FBgn0014445
FlyBase assigns this to be a Scer (yeast) gene, which is of course correct
But this means that we end up with 6 "yeast genes" with nervous syst…
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- Use FBte IDs from list generated in issue https://github.com/cbergman/transposons/issues/13
- Note: there are Symbol Synonyms and Name Synonyms
- Note: there are redundant synonyms for both symbols …
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https://www.ebi.ac.uk/ols/ontologies/caro/properties?iri=ttp%3A%2F%2Fwww.geneontology.org%2Fformats%2FoboInOwl%23created_by
see also: https://github.com/FlyBase/flybase-controlled-vocabulary/issu…
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https://bioentity.link//#/publication/10.1093/g3journal/jkae157
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Hi Ivan,
we tested Graphmap to align RNA-seq reads to the reference genome. For benchmark purposes, we tried to align the [reference transcripts](ftp://ftp.ensembl.org/pub/release-89/gtf/drosophil…
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FB:FBgn0031604 Elp3
elongator is no longer thought to be a histone acetyltransferase:
Elp3 Elongator complex protein 3 histone acetylation FlyBase Drosophila melanogaster IMP protein FB:FB…
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https://bioentity.link//#/publication/10.1093/g3journal/jkae230