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see http://stackoverflow.com/questions/17979563/maximum-likelihood-curve-model-fitting-in-python
`This question was voluntarily removed by its author`
essentially MIA, and miscmodels.nonlinls.py look…
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Hi prof Liu,
When I run mp-est, it comes out this error.
mpest control
Maximum Pseudo-likelihood Estimation of Species Trees (MPEST_1.5)
by…
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Using the attached alignment and this code within a jupyter notebook
```python
from cogent3 import get_app, load_aligned_seqs
aln = load_aligned_seqs("ENSG00000000971.fa", moltype="dna")
phylo…
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### Is your feature request related to a problem? Please describe.
The task of finding the MLE for a three-parameter (generalized) Pareto distribution boils down to finding _all_ roots of the (univ…
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The documentation `buildEstimator` method is sparse: the theory behind the `buildEstimator` method is not documented.
This is especially true for the maximum likelihood method, which is based on t…
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Implement the Lai (2021) and Zhang (2023) correct formula for RMSEA under FIML, esp. as current result can be varied by adding empty rows to the dataset.
Xijuan Zhang & Victoria Savalei (2020) Exam…
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Like I salid: Is there a way to make the model NOT correct by kinship?
I understand that setting KI = NULL makes the GAPIT function calculate a kinship matrix using the markers. And the manual says…
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The typical application of an analysis is to produce templates to run a maximum likelihood fit for hypothesis testing.
It would be nice to have the option of saving output histograms in an output `.r…
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Thank you for this package.
May I know if tau-squared (REML) is retrievable?