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Please remove for SPAC1B3.06c (I think this is a protein family problem, it isn't coq5. This is more related to some bacterial methyltransferases). it isn't conserved in cerevisiae.
GO:0006744 …
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For val for PTN000317053 ~#3399~ https://github.com/geneontology/go-annotation/issues/3399
term: tRNA (carboxymethyluridine(34)-5-O)-methyltransferase activity
def: Catalysis of the reaction: carbo…
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I'm picking up masses of mappings to this term from PAINT. Most appear to be off-target, but I haven't checked them all individually. The list of annotated genes includes kinases, phosphatases, …
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Hi!
I love the program and the visualizations! I have a question regarding using/running a customized
KEGG_decoder.py. I created a copy of the KEGG_decoder.py from my `/anaconda3/envs/KEGGDecoder…
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We have PAINT mappings of methyltransferases to
S-adenosylhomocysteine metabolic process
but these are n't really involved in S-adenosylhomocysteine metabolic process, it's jus the donor... (…
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**Submitting author:** @HajkD (Hajk-Georg Drost)
**Repository:** https://github.com/HajkD/LTRpred
**Version:** v1.1.0
**Editor:** @lpantano
**Reviewers:** @dcassol, @mdozmorov
**Archive:** 10.528…
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Hi there,
I recently use Deepsignal to detect DNA methylation and received the result as seen below.
```
1 387268 - 4855350 079a30f7-9f4c-4a7a-ad5b-39e3ef61530b t 0.565757 …
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enzyme.dat:
```
ID 2.1.1.125
DE Transferred entry: 2.1.1.319, 2.1.1.320, 2.1.1.321 and 2.1.1.322.
//
ID 2.1.1.126
DE Transferred entry: 2.1.1.319, 2.1.1.320, 2.1.1.321 and 2.1.1.322.
``…
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Prompted by original discussion from @ValWood at https://github.com/geneontology/go-ontology/issues/12184
@thomaspd commented that "An activity should not be named after a gene product, as a gene prod…
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I'm not sure that this is correct
GO:0048024 regulation of mRNA splicing, via spliceosome
it might be but is there a ref. I seems to methylate quite a few rRNAs and snRNAs of various types. …