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In order to provide an analogue for Epetra_IntVector, Tpetra rebuilds sizable portions of its library with Scalar=GO and Scalar=int (if int is not the GO). We clearly need Vector for moving around th…
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Hi there,
Thank you for your program! I've succesfully compiled the code and tested it on the provided examples . However, when testing it on independent data (using hg19.fa and a VCFv4.1 output fr…
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#3 から派生
iTunesアカウントに紐付けて登録が必要。
http://www.apple.com/jp/itunes/affiliates/
どちらのアカウントでやる??
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![image](https://user-images.githubusercontent.com/25891353/59371015-b7816780-8cf8-11e9-9f44-fa3a5073364d.png)
![image](https://user-images.githubusercontent.com/25891353/59371037-c49e5680-8cf8-11e…
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### Description
I have been trying to get phg to work on my system as a singularity image, but I have been facing an issue with that: the code assumes that the user always has a conda environment whi…
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### Description
I have extracted the hVCF files and built the k-mer index. Now, I want to map paired-end reads. When I run the following command:
export JAVA_OPTS="-Xmx800g"
phg map-kmers \
--…
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I have setup clair3 to run via docker and while the output from the command shows processing happening, no output file is written. The BAM file I'm using was created by aligning illumina short reads…
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```
Right now I can only select one value in the filters.
Example:
COL_NO='SF'
I would like to be able to do this;
COL_NO IN ('SF','FX','LL')
or
COL_NO='SF' OR COL_NO='FX' OR COL_NO='LL'
----------…
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### Description
Hello,
I used preparation script from SLURM usage docs but it seems like there is no command "prepare-slurm-align-file".
Usage: phg [] []...
Options:
--version Show the v…
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### Description
Hi folks. Minor UX bug. `phg map-kmers` does not fully strip a `.fastq.gz` extension as per what is written in the documentation [here](https://phg.maizegenetics.net/imputation/#optio…