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Hi all,
I was hoping to use TRFP to convert from PRM files to mzML, but I'm getting failures on all of them:
```
2023-05-17 21:04:11 ERROR Failed finding precursor for 6032
2023-05-17 21:04:11…
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La funzione `extract_with_proteins` restituisce un vettore di caratteri con `NA` quando non è presente il file "proteinGroups.txt".
Quindi `get_proteingroups_filepath` cerca nel database online un P…
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Hi, I recently found myself searching for the below example datasets in PRIDE. I had the message ‘**The requested project is not public**’ displayed on PRIDE webpage. I thought this could be because i…
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**Is your feature request related to a problem? Please describe.**
Tags template metadata are currently somewhat loose, undefined keywords.
**Describe the solution you'd like**
To take full adva…
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I want to know that how to download the four publicly available data sets
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Hi
I have a spectrum file (SWATH-DCIS-2-1-SWATH-CCIS2-2.wiff) from public dataset (http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD014194), the raw file has been converted to mzXML.…
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> Where will you submit your data as endpoints?
ENA, GEO, NCBI, genbank, pride, proteomexchange, zenodo, dataDyrad
ENA
GEO
NCBI
genbank
pride
proteomexchange
zenodo
dataDyrad
…
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# 生信爱好者周刊(第 68 期):
这里记录每周值得分享的生信相关内容,周日发布。
本杂志开源(GitHub: [ShixiangWang/weekly](https://github.com/ShixiangWang/weekly)),欢迎提交 issue,投稿或推荐生信相关内容。
[「生信周刊讨论区」](https://github.com/ShixiangWang/wee…
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In the xml of a data, cvParam PRIDE:0000411 used to provide the ftp URL to the data. For example
```r
> library(rpx)
> px pxurl(px)
[1] "ftp://ftp.pride.ebi.ac.uk/2012/03/PXD000001"
```
which …
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I'm getting a strange error message when I try to use `ppx.download()`. Here is the full traceback:
```
--------------------------------------------------------------------
error_temp …