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Hi all @jpfeuffer @timosachsenberg @enriquea @dai:
We have recently generated data for almost 100 datasets, differentially expression analyses (DE), and absolute/baseline expression analyses (AE). …
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- You are using `SomaDataIO` :partying_face: ... but have hit a road block :weary:
- Please search previous issues before creating a new one,
to ensure yours is not a duplicate. You can
[edit t…
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Hello!
I am doing the tutorial http://bioconductor.org/packages/3.10/bioc/vignettes/proteoQC/inst/doc/proteoQC.html
But i get the following error
> px
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Hello and thanks for developing MS-DAP! I am using the latest version of FragPipe to search and quantify DDA data. There have been some changes made in later versions of this software which affect o…
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Hi all,
I was hoping to use TRFP to convert from PRM files to mzML, but I'm getting failures on all of them:
```
2023-05-17 21:04:11 ERROR Failed finding precursor for 6032
2023-05-17 21:04:11…
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La funzione `extract_with_proteins` restituisce un vettore di caratteri con `NA` quando non è presente il file "proteinGroups.txt".
Quindi `get_proteingroups_filepath` cerca nel database online un P…
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Hi, I recently found myself searching for the below example datasets in PRIDE. I had the message ‘**The requested project is not public**’ displayed on PRIDE webpage. I thought this could be because i…
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**Is your feature request related to a problem? Please describe.**
Tags template metadata are currently somewhat loose, undefined keywords.
**Describe the solution you'd like**
To take full adva…
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Hi
I have a spectrum file (SWATH-DCIS-2-1-SWATH-CCIS2-2.wiff) from public dataset (http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD014194), the raw file has been converted to mzXML.…
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I want to know that how to download the four publicly available data sets