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Consider the following example:
```
library(tidyverse)
library(nnet)
library(emmeans)
# generate data ----------------------------------------------------------------
set.seed(1839)
n
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Your package offers support for simulating [vine copulas](https://dmey.github.io/synthia/copula.html#vine-copulas). However, I don't see examples demonstrating how to simulate data from a vine copula …
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`FindAllMarkers` returns the adjusted p-values as returned by calls to `FindMarkers` unmodified. But it should adjust for testing multiple groups too. One way to achieve FDR (for `test.use="DESeq2"`) …
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I have tried the following (see lessmini_threeslopeintercept.stan and phlyo_opsree_compact.R, there's also phlyo_opsree_serve1.R for running on midge, as these models are SLOW):
```
try
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**Feature request**
Thanks for making imputeTS, it is really useful and easy to use.
Please consider adding a function to inpute around a circle. I'm thinking specifically of wind direction data…
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I am trying to illustrate the benefit of `LedoitWolf` vs `EmpiricalCovariance` in connectivity estimation, but when simulating multivariate Gaussian signals with a given true covariance I have the imp…
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**Submitting author:** @dmey (D. Meyer)
**Repository:** https://github.com/dmey/synthia
**Version:** v1.1.0
**Editor:** @oliviaguest
**Reviewer:** @khinsen, @mnarayan
**Archive:** 10.5281/zenodo.53584…
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Hi,
I've fitted a CRF and I'm trying to figure out my results regarding the significance of my associations between species. With 'bootstrap_MRF' and 'plotMRF_hm' I get the confidence intervals, bu…
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I wrote up a procedure for doing so in the attached note.
@jkcshea let me know if it makes sense and looks feasible.
Here's a demonstration of why I think it will work:
```r
library("ivmte")
…
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Under some circumstances, it seems, the conditional correlation matrix is not being normalised properly.
(...or there is something else that I am missing entirely.)
Minimal code example to reprodu…