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# Refactoring Pipeline for `crew` and `apptainer`
> Notes and Checklist for Updating, Started by @kyle-messier
## Design targets for optimal parallelization and updating
### Download
> Re…
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I downloaded the pems-bay.h5 file from [https://zenodo.org/record/4263971](https://zenodo.org/record/4263971) and used [https://github.com/liyaguang/DCRNN/blob/master/scripts/generate_training_data.py…
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### Title
Clustintime: a toolbox for spatio-temporal clustering of fMRI data
### Leaders
Cris Tobías (@cristobias)
### Collaborators
_No response_
### Brainhack Global 2023 Event
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We propose an enhancement of the modifiers available in WKT literals with two additional optional coordinates, named _T_ and _L_, that could be used in the following manner:
- _T_ should be used fo…
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There are various packages/initiatives out there investigating ways to **validate models** in computational neuroscience, including [NeuronUnit](https://github.com/scidash/neuronunit) and the [HBP Val…
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Similar to benchmarks created for image classification, we would like to create a benchmark for video datasets.
A few tasks for tackling video datasets:
1. Identify ML training related to video …
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(spacetimeformer) adewdev@bootedeagle:~/Devtools/PyWS0/spacetimeformer-main-original/spacetimeformer$ python train.py spacetimeformer solar_energy --context_points 168 --target_points 24 --d_model 100…
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One of tobac's advantages is that it keeps each step in the tracking process separate. Right now, each step using tobac's various tracking functions produces a separate dataset or array.
However, a…
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@cmungall @matentzn @dosumis @addiehl @diatomsRcool @johnwjudkins
Ontobee shows [UBERON](http://www.ontobee.org/ontology/UBERON) has both `process` and `processual entity` classes. Is the `processu…
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Part 3 offers a generic way to load from OGC API Collections.
A couple of uncertainties:
- [As far as I can see it doesn't limit the scope.](https://github.com/opengeospatial/ogcapi-processes/blob…