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Hi there. I' currently experiencing and issue where Trinity does not recognize the --no_salmon indicator. I'm currently experience a loop of the following:
Please review usage info for accepted pa…
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Trinity in version 2.12.0 (down to 2.9) doesn't seem to be able to install all its dependencies properly. When running with Snakemake, the depending salmon cannot be found.
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Hi,
I am trying to run the following command:
`nohup snakemake --latency-wait 60 --jobs 100 --config samples_file=sample.txt --cluster 'bsub -n 8 -R "rusage[mem=64000] span[hosts=1]" -oo log.bsub' &…
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On RHEL 8.6
***Error***
```
TASK [trinity/config-manager : Install config_manager pip package] **************************************************************************************************…
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### Steps to reproduce
I am trying to use DARTS scheduler from the latest master branch (commit 4131e05d441f6aa3004632c61e982c63f2496cb9 of Gitlab) and get the following error:
```
/trinity/home/…
Muxas updated
5 months ago
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Mon Sep 30 15:12:54 UTC 2024, there were errors when running autoupdate
Cannot reopen PR 5990 for tools/fastk
Cannot reopen PR 5692 for tools/pretext
Cannot reopen PR 5616 for tools/raxml
Cannot reo…
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Dear Community,
I've been attempting to run Trinity unsuccessfully.This was my command:
Trinity --seqType fq --max_memory 50G --left A51.fq --right A52.fq --CPU 10
However I got the following err…
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I've been trying to use Trinity and got the following error. I have already installed the DB_File, but this issue continue appearing. I don't know what is going on. Could you help me with this, plea…
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Hi all,
I keep getting the below error with the trinity script, could you please suggest what is going wrong here?
______ ____ ____ ____ ____ ______ __ __
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