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Dear Biocurators,
I am writing to request a new GO term, which arose whilst annotating paper PMID: 21768538 (Wu et al., 2011).
It is demonstrated in Figures 3 and 4 in this paper that the type of fl…
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Hi,
It looks quite odd to me that "axonemal dynein complex" is_a "cytoplasmic dynein complex".
I see that the term "axoneme part" is_a "cytoplasmic part", and perhaps this is part of the reason.
Ho…
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I can't remember if this is fixed in 4.X, but in 3.5.1, annotation assertions are not sorted deterministically on output.
This leads to spuriously large diffs for things like GO; e.g. one day's wo…
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E.g. try 'ileum mucosa' in MA
Not necessarily OLS' fault. Just a clash of implicit assumptions, between obo-edit developed ontologies and Protege developed ontologies.
This may be subsumed into a ge…
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our ontology browsing up and down the subclass hierarchy is not very intuitive. I had an idea that maybe there was a way to reuse some functionality from AmiGO for this purpose?
or if nothing else, p…
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tried using this gem but getting `no such file to load -- logstash-input-kinesis_jars` .
`logstash-input-kinesis_jars` is added to https://github.com/codekitchen/logstash-input-kinesis/blob/master/…
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Hey there,
I'm working on a new API project where I'm using AMS with Grape and Swagger-UI. I wanted to use the 0.10.0 release candidates so I could utilize JSON-API in full while building my API. How…
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Im using ruby 2.2.2pre95 with rails 4.2.3, Its showing this message:
```
DEPRECATION WARNING: The configuration option `config.serve_static_assets` has been renamed to `config.serve_static_files` to …
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The class `uk.ac.manchester.cs.owl.explanation.ordering.DefaultExplanationOrderer` seems to be required by the protege mansplainer; however, the [class lives](https://github.com/owlcs/owlapi/blob/mas…
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