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Currently, on the Toshiba machine:
LIBRARY_PATH:
~/lib/fftw-3.3.6-pl2/api/
CPLUS_INCLUDES_PATH:
~/lib/boost_1_65_1/:~/lib/fftw-3.3.6-pl2/api/
Gets you as far as:
/usr/bin/ld: cannot find -…
pc494 updated
6 years ago
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Hi guys,
I have noticed for the last few weeks that every time I update my copy of pyXem that stuff that I rely on is removed which breaks my code (i.e. ). First, I saw that it is no longer possible …
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A crystallographic map produced by the save_map function in pyXem creates a horizontally flipped image when imported as an EBSD file in MTEX. I'm guessing this is because in pyXem the origin point is …
fuk21 updated
6 years ago
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Loading an hspy (HDF5) file saved from pyxem again using 'load()' results in the data being loaded as Signal2D rather than as ElectronDiffraction (or 'electron_diffraction') even when passing the sign…
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get_radial_profile in electron_diffraction does not work properly if centers is not constant over the stack. The reason is that a change in the center values could change the length of the average pro…
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In pyxem/signals/diffraction_vectors.py the function get_diffracting_pixels_map() appears to result in an error, seemingly due to the handling of the diffraction vectors signal (and/or how it interact…
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```
/home/pc494/anaconda3/lib/python3.6/site-packages/pyxem-0.5-py3.6-linux-x86_64.egg/pyxem/utils/__init__.py:115: RuntimeWarning: divide by zero encountered in double_scalars
return np.dot(inten…
pc494 updated
6 years ago
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While trying to plot patterns from a library through library.plot() following error turns up:
---------------------------------------------------------------------------
AttributeError …
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The specification of install_requires in setup.py is causing an issue at the moment - most easily solved by commenting this out of the setup file but not clear what the underlying issue is.
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in expt_utils you're currently doing:
`r = (r+0.5).astype(np.int)`
seems much cleaner to use:
https://docs.scipy.org/doc/numpy-1.13.0/reference/generated/numpy.rint.html
with correct dtype…
pc494 updated
6 years ago