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Drop any issues with instance docs in this issue
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Original issue reported on code.google.com by `andrewro...@googlemail.com` on 16 Oct 2008 at 3:57
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spectrum_reference in FeatureXML is interpreted as int in 'concordance' with the (juck) featureXML schema xs:unsignedInt -so is idXML, but treating it at read as OpenMS::String.
Whereas in MzML, 'the…
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When loading `mzid` files that do not return the id filename as part of the data.frame column, `addIdentificationData` throws the following error via `utils.addSingleIdentificationDataFile`:
``` r
E…
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Tools that formerly expected idXML ID input only were fine with test/TOPPAS anonymous file suffix (._[__]tmp).
This will crash with the option of several id input formats.
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Jorrit: I just upgraded a test server to 14.04, and compiling percolator converters errors when doing make. Attached stderr below. I see this both when using ubuntu’s packaged cmake, and when using cm…
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I can't seem to decide whether users should be encouraged to change the content of mzID objects through setters? It kinda depends on whether mzID objects should reflect the content of a specific file …
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Since the preferred way of storing and handing mzIdentML files is in compressed form (see for reference topic 7.1 in http://www.psidev.info/sites/default/files/mzIdentML1.1.0.pdf) we should add a capa…
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The namespace used to parse the mzid file is hard coded in the `mzID` constructor.
Would it be possible to (1) add support for mzIdentML 1.0 and, if yes, (2) implement a mechanism to detect the versi…