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I'm closing an old issue #597 and providing a new list of files that returns errors and warnings with `flake8`.
Below is the output of
```
for f in `find . -name "*.py" ! -name "test_auto*"`; do …
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### Summary
I tried to connect some MapNode to parallelize my pipeline, but I found maybe a bug, I know that the input for a MapNode is a list containing some string, so the next MapNode will process…
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The purpose of this classification proposal is to capture how users _think_ about their data and how they would want to _search_ for it, but not to be a ground truth, MR physics-based classification t…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/cbg-ethz/perturbatr
Confirm the following by edit…
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Nipype is not the most pep8-abiding package out there. Maybe this is unavoidable, but I do think in general code that follows these guidelines is something to strive for. Below is a current (7/1/2013)…
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Hi, first thanks for sharing this analysis tool. I prefer Python much more to R, though most Bioinformatics tools are written in R. Here I want to ask a question about data processing before we feed i…
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Hi, nipype experts:
I have a question about datasink, I use MapNode to parallelize my pipeline, and use datasink to grab all the outputs for each subject like this:
>
> # get the inf…
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Hi,
I am trying to run AFQ using the branch matlab2017a. So far, I was able to create the tensors but my code breaks when checking the tensor output when accessing the function dtiRawCheckTensors():…
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Whereas interfaces can be tool-oriented, workflows should not be tool-oriented even if all the interfaces used by a workflow belong to a unique package (e.g. fsl).
I propose to change the workflows t…
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The init_preprocessing doesn't work for hcp7t. The diagnostic message is not meaningful. Looking at the code it looks like there is a step of applying the mask to .bvecs and .bvals. These two kind of …