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The long-term gut bacterial signature of a wild primate is associated with a timing effect of pre- and postnatal maternal glucocorticoid levels – Simone Anzà et al. – Microbiome 2023
https://microbio…
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Deep nasal sinus cavity microbiota dysbiosis in Parkinson's disease --Pal et al. -- NPJ Parkinson's disease
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8655044/
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The biological effects of microencapsulated organic acids and botanicals induces tissue-specific and dose-dependent changes to the Gallus gallus microbiota – Kristina M. Feye – BMC Microbiology
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Hi, I'm new to Ancom-BC2 and I have been trying to run Ancombc2 on a tse that was coerced from a phyloseq object. I'm currently getting the following error and warning messages
Error in `[.data.fram…
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Integrating metagenomics with metabolomics for gut microbiota and metabolites profiling in acute pancreatitis – Yan Jia – Scientific Reports
https://www.nature.com/articles/s41598-024-72057-z
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Hi,
I attempted to run the ancombc2 function using the example provided in ?ancombc, but it resulted in an aborted R session.
Could you please help me with fixing this issue?
Thanks,
Dana.
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**Is your feature request related to a problem? Please describe.**
The current solution for multiple demux/denoise runs per analysis is to have them run in series. This is quite inefficient for large…
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Hello,
Thanks to have published the ANCOM-BC tool.
I wonder why ANCOM-BC doesn’t do all possible pairwise comparisons?
For example for the variables “nationality” and “BMI” in your Bioconduc…
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**Is your feature request related to a problem? Please describe.**
The `agglomerateByRank` function only accepts ranks that are listed in `TAXONOMY_RANKS` of the _mia_ package. This prevents agglom…
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Hi,
I am having the same issue as closed issue #205 with rand_formula = not null crashing R and RStudio since I upgraded to 4.3.1.
I have done a forced reinstall of phyloseq as suggested in #205, b…