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Seems that the channel indexes are 0-based and that the resave plugin is 1-based
`java.lang.RuntimeException: File 'BOB.czi' has only channels [0 ... 1], but you want to open channel 2. Stopping.
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lacan updated
8 years ago
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I tried a multiview-deconvolution and got this exception:
``` java
java.lang.NullPointerException
at spim.fiji.spimdata.interestpoints.InterestPointList.loadInterestPoints(InterestPointList.java:…
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Over time there have been various issues and dependency skew with the sciview update site(s) not matching what is currently shipped on the core update sites for vanilla Fiji. E.g. #422, #392, #179. Th…
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I'm using Elastix for 2D/3D registrations. Since I'm using Fiji for most of my image processing steps I was quite happy to find this plugin - thank you @tischi. I have a short question: Since I'm nor…
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Hello,
first time user of Big Stitcher with the following problem.
I can not load my Array Tomography (SEM) data set with 6x15 tiles, 21 sections (11GB).
Naming of files (output from the microsc…
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Hello,
I am trying to stitch a 694 GB .nd2 file of a cleared mouse brain acquired with a confocal. The tiles were generated as z-stacks before moving in the xy plane.
BigStitcher starts export and…
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See [this forum post](https://forum.image.sc/t/ffmpeg-plugin-does-not-support-virtual-stack-slice-deletion/81112?u=imagejan).
The `deleteSlice` method likely need to be overridden in this code:
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Bioformats version 7.0.1
This bug report is related to ImageSc post https://forum.image.sc/t/omero-fiji-plugin-error-invalid-image-id/89470/11.
In brief, the fiji-omero plugin reports an error …
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Hi,
i'm trying to run your plugin on Fedora. Do you know someone who made it run on a linux-distribution?
So, here is my problem:
I downloaded a fresh Fiji, did all the updates, then updated Jython by…
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Description
Hi,
We develop a plugin for Fiji that is called Fijiyama. As this tool switches between Java /Fiji and ITK, we developed a first draft of a class for making conversion between Fiji's Ima…
Rocsg updated
6 months ago