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The trolls in area ID4002 do not die when damage by fire/acid. Nor do they fall down when they are low health.
I managed to fix it with near infinity by changing some items on IWD trolls to match t…
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Hi,
I am running into an issue with the HLA typing that I cannot figure out. The program fails with the message:
Traceback (most recent call last):
File "bin/optitype_ext.py", line 31, in
…
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(ldsc) python munge_sumstats.py \
> --sumstats /mnt/ndisk1/Student/zhouyi/GWAS_tools/TWAS/data/wellbeing_sum/WBresults.txt \
> --N 491455 \
> --signed-sumstats beta,0 \
> --snp snpid \
> --out SW…
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Is there any way to obtain the quality (r2 or INFO) of imputing HLA-* ?
So far, after doing the prediction I can only see the alleles and only one probability.
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I'm using optitype/1.3.1, specifying solver=cbc in config.ini, using hla_reference_dna.fasta. i prefilter my reads using razers3. This is the output i'm getting with my own data.
```
A1 …
kylec updated
4 years ago
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I was wondering it the tool can be run with more than one gene string (e.g. -g HLA-A,HLA-B).
Thank you!
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```
~/st-link-v2-clone/config$ openocd -f interface/stlink.cfg -f myconfig.cfg
Open On-Chip Debugger 0.11.0
Licensed under GNU GPL v2
For bug reports, read
http://openocd.org/doc/doxygen/bugs.h…
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- **Workflow changes**
- [x] Sample name as workflow parameter for better output dataset naming
- [x] PEAR
- [x] give percentage along with count
- [x] adapter clipping (Cutadapt)
- [ ]…
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Hi @EricKutschera ,
Using Ensembl gtf and fa with `HLA` contigs. I see the below error with `ESPRESSO_S.pl` step
```
[Thu May 18 21:40:23 2023] Summarizing annotated splice junctions for eac…
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Hi, the software seems very good, but I am new in metagenome analysis and I have questions about the selection of appropriate reference genomes (indexes) when using 'hostile'.
1.
I read the "Refe…