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Hello,
I recently uploaded a few Mpox sequences into the the web version of Nextclade.
I noticed several of these had a OPG069:45-167 frame shift flagged.
 😄 It performs reference-guided MSA by wrapping around Minimap2…
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Based on this discussion: https://github.com/HGVSnomenclature/hgvs-nomenclature/discussions/49.
As the r. coordinate type refers to mature (coding) RNA molecules, descriptions using the r. coordina…
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SymTCP: Eluding Stateful Deep Packet Inspection with Automated Discrepancy Discovery
Zhongjie Wang, Shitong Zhu, Yue Cao, Zhiyun Qian, Chengyu Song, Srikanth V. Krishnamurthy, Kevin S. Chan, Tracy D.…
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Generating UUIDs contiguously can increase insertion performance by making inserts happen on warm parts of the cache, instead of totally random parts.
Right now: UUID generators pick a random 128-b…
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Hello
Thank you for this great tool.
I am trying to call TE insertions on a tree genome which is ~ 830 Mb.
My config.yaml file is as follows:
```
# all path can be relatif or absolute
D…
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Currently, we just set hard limits for the expected total length of a kinase domains. We heavily deprioritize anything > 350 aa or < 191 aa.
Probably the best approach is to use a quality multiple se…