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For now, I'd take the current ODE Bayesian Parameter estimation benchmarks offline and stop quoting them as up-to date evidence that Julia is currently 3-5 times faster than Stan for ODE problems. If …
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Diffeqs should perhaps updated to use the new `ode_rk45 `. I can take a look at this personally, if you want.
Sorry for the initial blank issue, I hit enter by accident while drafting this 😕 .
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Caros alunos,
par ajudar na seleção de temas para os seus projetos de modelagem, vou listar abaixo algumas sugestões de buscas no Scholar.
fiquem à vontade para olhar os artigos e selecionar um …
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In theophylline SAEM ABC I get this error. Everything else runs fine.
*** Iteration #2, now using ABC tolerance = 5.000000e-01 ***Undefined function or variable 'XSum'.
Error in abcsmc_filter (l…
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Okay I'm trying to solve this particular set of ODEs and I'm unable to find out where I'm going wrong.
```python3
import sympy as sp
R = sp.Function('R')
F = sp.Function('F')
t = sp.var('…
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### Describe the issue:
I have encountered a problem of running multiple chains. I tried the example in Sequential Monte Carlo - Approximate Bayesian Computation. The model could work under only one …
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This section is broken (again?) https://turinglang.org/v0.31/tutorials/10-bayesian-differential-equations/#inference-of-a-stochastic-differential-equation
The plot in the tutorials shows no samplin…
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We now have a couple of simple ODE benchmarks, but could definitely afford to add a lot more.
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We need to populate the recent publications page with recent papers. We need the authors list, abstract, link to pdf, downloaded pdf, and a figure for the preview. This can be a figure from the paper …
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# Scenario 4: Microbial Regnets
The human gut microbiome is an increasingly important area of study for multiple infectious diseases and chronic conditions, including COVID-19 and long COVID. Howev…